Remove TABs from examples

Rename TruePrefix to Prefix; use fixity options with NONE for what was Prefix.

90+% of this work was done by Ramana Kumar. The following list are
the commits for a series of individual commits that have been squished
into one big change:
* remove mention of TruePrefix from the add_rule docfile
* first batch of changes removing TruePrefix from src/parse
* replace TruePrefix by Prefix in boolScript.sml
* remove TruePrefix from Rsyntax
is a fixity ever required for new_specification?
* some more Prefix -> NONE and TruePrefix -> Prefix in theories
* TruePrefix changes for datatype
* TruePrefix changes for res_quan
* TruePrefix->Prefix in a TeX selftest
* TruePrefix changes for quotient
* TruePrefix changes for integer and real
* fix quotient examples for TruePrefix removal
* more fixes for quotient examples
* fixes for lambda example for TruePrefix removal
* Reword description manual in light of removal of TruePrefix.
* Fix msgTheory quotient example; Poly 5.3 had problems with monotypes.
* Fixes for files in examples/lambda given removal of TruePrefix.
* Fix in examples/unification given removal of TruePrefix.
* Fix in examples/HolCheck given removal of TruePrefix.
* Fixes in examples/acl2 given removal of TruePrefix.

Get the HolCheck directory to build. It would be nice to get the
AMBA example to work as well, but this isn't quite there just yet.
The bulk of the problems in HolCheck were the change to the string
type, with one or two caused by the additional pickiness of
parse_in_context.

muddy, HolBdd and HolCheck moved into examples. Mainly to simplify HOL installation requirements.