Lines Matching refs:scaffIndex
286 int *scaffIndex;
4317 if (dtd->scaffIndex) {
4318 int *temp = (int *)REALLOC(dtd->scaffIndex,
4322 dtd->scaffIndex = temp;
4336 dtd->scaffIndex[dtd->scaffLevel] = myindex;
4355 && (dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type
4358 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type
4483 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel - 1]].type
4543 dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel]].quant = quant;
5552 p->scaffIndex = NULL;
5592 ms->free_fcn(p->scaffIndex);
5593 p->scaffIndex = NULL;
5629 ms->free_fcn(p->scaffIndex);
5763 newDtd->scaffIndex = oldDtd->scaffIndex;
6164 if (!dtd->scaffIndex) {
6165 dtd->scaffIndex = (int *)MALLOC(groupSize * sizeof(int));
6166 if (!dtd->scaffIndex)
6168 dtd->scaffIndex[0] = 0;
6192 CONTENT_SCAFFOLD *parent = &dtd->scaffold[dtd->scaffIndex[dtd->scaffLevel-1]];