Lines Matching refs:nlist
109 static void close_i_nblist(t_nblist *nlist)
111 int nri = nlist->nri;
113 nlist->jindex[nri+1] = nlist->nrj;
114 len=nlist->nrj - nlist->jindex[nri];
115 if (nlist->solvent==esolMNO)
116 len *= nlist->nsatoms[3*nri];
117 if(len > nlist->maxlen)
118 nlist->maxlen = len;
120 static void close_nblist(t_nblist *nlist)
122 if (nlist->maxnri > 0) {
123 int nri = nlist->nri;
124 if ((nlist->jindex[nri+1] > nlist->jindex[nri]) &&
125 (nlist->gid[nri] != -1)) {
126 nlist->nri++;
127 nlist->jindex[nri+2] = nlist->nrj;
135 static void add_j_to_nblist(t_nblist *nlist,atom_id j_atom)
137 int nrj=nlist->nrj;
138 nlist->jjnr[nrj] = j_atom;
139 nlist->nrj ++;